5002 Protein Set - Page 6







6) Alpha-helix
Three-dimensional struture of a protein consists of alpha-helix spiral portion, beta-sheet flat surface portion and random-coil portion, which are called Secondary structures of a protein. PDB data includes numbers of peptides forming the alpha-helix. Prepare the helices beforehand and insert them into the backbone using each of them as one unit.



Fig. 9




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